--- !ruby/object:ProtocolDataset::DataSet #=============================================================================== # Data set description #=============================================================================== description: !ruby/object:ProtocolDataset::DataSetDescription name: PLA15 references: "10.1021/acs.jcim.9b01171": "Kříž K.; Řezáč, J.; J. Chem. Inf. Model.2020, 60, 1453-1460" text: "PLA15 - protein-ligand interactions in active site model" method_geometry: | Fragments from processed PDB files method_energy: | Composite calculation with B3LYP-D3/DZVP-DFT for the whole system, with pairwise interactions with each fragment replaced with MP2-F12/cc-pVDZ-F12 + DLPNO-CCSD(T)/aug-cc-pVDZ correction (Tight DLPNO thresholds) units: kcal/mol global_setup: job: interaction geometry_setup_from_file: yes #=============================================================================== # Items #=============================================================================== items: - !ruby/object:ProtocolDataset::DataSetItem name: 01 10GS shortname: 01_10GS geometry: PLA15:10GS reference_value: -242.583 tags: "" - !ruby/object:ProtocolDataset::DataSetItem name: 02 2CET shortname: 02_2CET geometry: PLA15:2CET reference_value: -247.699 tags: "" - !ruby/object:ProtocolDataset::DataSetItem name: 03 2FVD shortname: 03_2FVD geometry: PLA15:2FVD reference_value: -88.726 tags: "" - !ruby/object:ProtocolDataset::DataSetItem name: 04 2OBF shortname: 04_2OBF geometry: PLA15:2OBF reference_value: -199.162 tags: "" - !ruby/object:ProtocolDataset::DataSetItem name: 05 2P4Y shortname: 05_2P4Y geometry: PLA15:2P4Y reference_value: -157.143 tags: "" - !ruby/object:ProtocolDataset::DataSetItem name: 06 2VOT shortname: 06_2VOT geometry: PLA15:2VOT reference_value: -238.717 tags: "" - !ruby/object:ProtocolDataset::DataSetItem name: 07 2VW5 shortname: 07_2VW5 geometry: PLA15:2VW5 reference_value: -94.099 tags: "" - !ruby/object:ProtocolDataset::DataSetItem name: 08 2XB8 shortname: 08_2XB8 geometry: PLA15:2XB8 reference_value: -178.476 tags: "" - !ruby/object:ProtocolDataset::DataSetItem name: 09 2YKI shortname: 09_2YKI geometry: PLA15:2YKI reference_value: -92.145 tags: "" - !ruby/object:ProtocolDataset::DataSetItem name: 10 2ZX6 shortname: 10_2ZX6 geometry: PLA15:2ZX6 reference_value: -231.047 tags: "" - !ruby/object:ProtocolDataset::DataSetItem name: 11 3G0W shortname: 11_3G0W geometry: PLA15:3G0W reference_value: -66.594 tags: "" - !ruby/object:ProtocolDataset::DataSetItem name: 12 3GNW shortname: 12_3GNW geometry: PLA15:3GNW reference_value: -77.382 tags: "" - !ruby/object:ProtocolDataset::DataSetItem name: 13 3NOX shortname: 13_3NOX geometry: PLA15:3NOX reference_value: -244.475 tags: "" - !ruby/object:ProtocolDataset::DataSetItem name: 14 3PE2 shortname: 14_3PE2 geometry: PLA15:3PE2 reference_value: -127.532 tags: "" - !ruby/object:ProtocolDataset::DataSetItem name: 15 4GID shortname: 15_4GID geometry: PLA15:4GID reference_value: -190.367 tags: ""